C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482392 ARMC9-006 ENSG00000135931 9606 + 2:231198643-231215280 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLungMuscleENST00000482392
Transcript ID Brain Heart Kidney Lung Muscle
ENST00000482392 3.563±0.00 0.543±0.00 0.033±0.00 3.912±0.00 0.611±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L0 CIL_0004L0_0002 CGP 2:231198546-231401164

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153653 Armc9-009 retained_intron Mus_musculus 0 333
ENSMUST00000131412 Armc9-008 protein_coding Mus_musculus 0 333
ENSMUST00000027434 Armc9-002 protein_coding Mus_musculus 0 333
ENSMUST00000113309 Armc9-001 protein_coding Mus_musculus 0 333
ENSMUST00000134858 Armc9-007 processed_transcript Mus_musculus 0 333
ENSMUST00000153389 Armc9-006 retained_intron Mus_musculus 0 333
ENSMUST00000135973 Armc9-005 retained_intron Mus_musculus 0 333
ENSMUST00000155168 Armc9-004 retained_intron Mus_musculus 0 333
ENSMUST00000123618 Armc9-003 retained_intron Mus_musculus 0 333
ENSMUST00000135197 Gm21972-001 nonsense_mediated_decay Mus_musculus 0 296
ENSMUST00000186509 Armc9-013 protein_coding Mus_musculus 0 231

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