C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | regulator of calcineurin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000482533  |
RCAN1-006 |
ENSG00000159200 |
9606 | - |
21:34516484-34524289  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008ON | CIL_0008ON_0001 | VISTA | 21:34142879-34745057 |
| CIL_0007SX | CIL_0007SX_0001 | VISTA | 21:34145397-34749042 |
| CIL_0008OM | CIL_0008OM_0001 | VISTA | 21:34146393-34747421 |
| CIL_0008ZS | CIL_0008ZS_0001 | VISTA | 21:34243666-34847364 |
| CIL_00094R | CIL_00094R_0001 | VISTA | 21:34258399-34859715 |
| CIL_00078G | CIL_00078G_0001 | CGP | 21:34446688-34615142 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | TAS | DNA binding |
| GO:0003700 | TAS | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0006355 | TAS | regulation of transcription, DNA-templated |
| GO:0007165 | TAS | signal transduction |
| GO:0007417 | TAS | central nervous system development |
| GO:0008015 | TAS | blood circulation |
| GO:0019722 | IEA | calcium-mediated signaling |
| GO:0042802 | IPI | identical protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000023672
|
Rcan1-201 | protein_coding | Mus_musculus | 0 | 774 |
|
ENSMUST00000060005
|
Rcan1-202 | protein_coding | Mus_musculus | 0 | 774 |
