C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484566 DDX39B-022 ENSG00000198563 9606 - 6:31530219-31535475 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverOvaryPlacentaTestisENST00000484566
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000484566 40.571±0.00 82.382±0.00 58.450±0.00 47.398±0.00 45.660±0.00 13.755±0.00 54.868±0.00 37.808±0.00 44.271±10.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172549 Ddx39b-004 protein_coding Mus_musculus 0 837
ENSMUST00000173731 Ddx39b-006 protein_coding Mus_musculus 0 837
ENSMUST00000068056 Ddx39b-001 protein_coding Mus_musculus 0 837
ENSDART00000052355 ddx39b-001 protein_coding Danio_rerio 0 457
ENSMUST00000174164 Ddx39b-005 retained_intron Mus_musculus 0 191
ENSMUST00000174757 Ddx39b-002 protein_coding Mus_musculus 7e-24 115

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