C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000052355 ddx39b-001 ENSDARG00000036069 7955 + 19:27825513-27843347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052355
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052355 10.949±1.89 6.611±3.23 9.978±1.77 0.533±0.00 4.663±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068056 Ddx39b-001 protein_coding Mus_musculus 0 977
ENSMUST00000172549 Ddx39b-004 protein_coding Mus_musculus 0 977
ENSMUST00000173731 Ddx39b-006 protein_coding Mus_musculus 0 977
ENSMUST00000174164 Ddx39b-005 retained_intron Mus_musculus 0 553
ENSMUST00000174757 Ddx39b-002 protein_coding Mus_musculus 0 497
ENST00000376177 DDX39B-006 protein_coding Homo_sapiens 0 872
ENST00000376185 ATP6V1G2-DDX39B-001 nonsense_mediated_decay Homo_sapiens 0 953
ENST00000383508 DDX39B-003 protein_coding Homo_sapiens 0 959
ENST00000396172 DDX39B-001 protein_coding Homo_sapiens 0 953
ENST00000400293 DDX39B-006 protein_coding Homo_sapiens 0 878
ENST00000400295 DDX39B-002 protein_coding Homo_sapiens 0 959
ENST00000400296 DDX39B-001 protein_coding Homo_sapiens 0 959
ENST00000412106 DDX39B-003 protein_coding Homo_sapiens 0 959
ENST00000412330 DDX39B-002 protein_coding Homo_sapiens 0 959
ENST00000412386 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000413678 DDX39B-001 protein_coding Homo_sapiens 0 959
ENST00000414440 DDX39B-003 protein_coding Homo_sapiens 0 959
ENST00000415390 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000415689 DDX39B-001 protein_coding Homo_sapiens 0 959
ENST00000416863 DDX39B-002 protein_coding Homo_sapiens 0 959
ENST00000417023 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000417995 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000420337 DDX39B-001 protein_coding Homo_sapiens 0 824
ENST00000422243 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000426766 DDX39B-002 protein_coding Homo_sapiens 0 824
ENST00000427425 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000427489 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000428107 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000430703 DDX39B-006 protein_coding Homo_sapiens 0 878
ENST00000430784 DDX39B-001 protein_coding Homo_sapiens 0 953
ENST00000431360 DDX39B-002 protein_coding Homo_sapiens 0 953
ENST00000431908 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000432549 DDX39B-019 protein_coding Homo_sapiens 0 497
ENST00000433293 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000437943 DDX39B-006 protein_coding Homo_sapiens 0 745
ENST00000438578 DDX39B-006 protein_coding Homo_sapiens 0 878
ENST00000441425 DDX39B-002 protein_coding Homo_sapiens 0 959
ENST00000445218 DDX39B-003 protein_coding Homo_sapiens 0 959
ENST00000445602 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000446328 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000446341 DDX39B-006 protein_coding Homo_sapiens 0 878
ENST00000448000 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000448296 DDX39B-001 protein_coding Homo_sapiens 0 959
ENST00000448800 DDX39B-003 protein_coding Homo_sapiens 0 824
ENST00000450987 DDX39B-006 protein_coding Homo_sapiens 0 872
ENST00000452792 DDX39B-019 protein_coding Homo_sapiens 0 503
ENST00000453138 DDX39B-001 protein_coding Homo_sapiens 0 959
ENST00000453381 DASS-161H22.6-001 nonsense_mediated_decay Homo_sapiens 0 953
ENST00000453488 DDX39B-006 protein_coding Homo_sapiens 0 878
ENST00000455400 DDX39B-020 protein_coding Homo_sapiens 0 374
ENST00000456476 DDX39B-002 protein_coding Homo_sapiens 0 959
ENST00000456666 DDX39B-003 protein_coding Homo_sapiens 0 959
ENST00000458640 DDX39B-002 protein_coding Homo_sapiens 0 953
ENST00000461254 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000462256 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000464411 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000467581 DDX39B-008 processed_transcript Homo_sapiens 0 497
ENST00000467694 DDX39B-008 protein_coding Homo_sapiens 0 503
ENST00000468089 DDX39B-008 processed_transcript Homo_sapiens 0 503
ENST00000473685 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000482080 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000482195 DDX39B-008 retained_intron Homo_sapiens 0 503
ENST00000483957 DDX39B-008 processed_transcript Homo_sapiens 0 503
ENST00000484344 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000484566 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000485534 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000485571 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000487410 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000489325 DDX39B-008 processed_transcript Homo_sapiens 0 503
ENST00000489688 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000490297 DDX39B-008 retained_intron Homo_sapiens 0 503
ENST00000493350 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000493860 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000494457 DDX39B-004 retained_intron Homo_sapiens 0 394
ENST00000495391 DDX39B-008 processed_transcript Homo_sapiens 0 503
ENST00000495997 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000497007 DDX39B-022 nonsense_mediated_decay Homo_sapiens 0 457

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