C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | basonuclin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000484726  |
BNC2-001 |
ENSG00000173068 |
9606 | - |
9:16418294-16870760  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007PP | CIL_0007PP_0001 | UCNEbase | 9:15728012-17487698 |
| CIL_000148 | CIL_000148_0001 | CGP | 9:16409503-17503923 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005886 | IDA | plasma membrane |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107198
|
Bnc2-007 | protein_coding | Mus_musculus | 0 | 3736 |
|
ENSMUST00000176612
|
Bnc2-004 | protein_coding | Mus_musculus | 0 | 3454 |
|
ENSMUST00000102820
|
Bnc2-002 | protein_coding | Mus_musculus | 0 | 3109 |
|
ENSMUST00000176691
|
Bnc2-001 | protein_coding | Mus_musculus | 0 | 3107 |
|
ENSMUST00000175800
|
Bnc2-005 | protein_coding | Mus_musculus | 0 | 1454 |
|
ENSMUST00000176971
|
Bnc2-012 | protein_coding | Mus_musculus | 0 | 1290 |
|
ENSMUST00000176418
|
Bnc2-006 | protein_coding | Mus_musculus | 0 | 1105 |
|
ENSMUST00000175757
|
Bnc2-022 | processed_transcript | Mus_musculus | 0 | 1083 |
|
ENSMUST00000123276
|
Bnc2-003 | retained_intron | Mus_musculus | 0 | 959 |
|
ENSMUST00000176346
|
Bnc2-015 | nonsense_mediated_decay | Mus_musculus | 0 | 898 |
|
ENSMUST00000177256
|
Bnc2-018 | processed_transcript | Mus_musculus | 0 | 745 |
|
ENSMUST00000176947
|
Bnc2-016 | protein_coding | Mus_musculus | 0 | 619 |
|
ENSMUST00000176702
|
Bnc2-011 | protein_coding | Mus_musculus | 0 | 599 |
|
ENSMUST00000175969
|
Bnc2-017 | protein_coding | Mus_musculus | 0 | 568 |
|
ENSMUST00000176476
|
Bnc2-019 | processed_transcript | Mus_musculus | 0 | 521 |
|
ENSMUST00000177277
|
Bnc2-010 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000176370
|
Bnc2-014 | protein_coding | Mus_musculus | 0 | 468 |
|
ENSMUST00000177040
|
Bnc2-020 | protein_coding | Mus_musculus | 0 | 289 |
|
ENSMUST00000175756
|
Bnc2-013 | protein_coding | Mus_musculus | 0 | 265 |
|
ENSMUST00000176601
|
Bnc2-009 | protein_coding | Mus_musculus | 0 | 261 |
|
ENSMUST00000176998
|
Bnc2-008 | protein_coding | Mus_musculus | 0 | 261 |
|
ENSMUST00000176264
|
Bnc2-021 | processed_transcript | Mus_musculus | 4e-33 | 148 |
