C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pre-mRNA processing factor 38B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485810 PRPF38B-005 ENSG00000134186 9606 + 1:108697700-108699385 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000485810
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000485810 0.952±0.00 1.390±0.00 2.452±0.00 3.581±0.00 1.165±0.00 0.992±0.00 2.223±0.00 4.923±0.00 1.722±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125208 Prpf38b-006 processed_transcript Mus_musculus 0 673
ENSMUST00000029480 Prpf38b-001 protein_coding Mus_musculus 0 555
ENSMUST00000129273 Prpf38b-003 processed_transcript Mus_musculus 0 555
ENSMUST00000127478 Prpf38b-005 processed_transcript Mus_musculus 0 551
ENSMUST00000156808 Prpf38b-004 processed_transcript Mus_musculus 0 466

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