C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485881 HSPA8P9-001 ENSG00000241478 9606 + 3:137880295-137882237 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000485881
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000485881 0.044±0.00 0.007±0.00 0.022±0.00 0.094±0.00 0.101±0.00 0.068±0.00 0.024±0.00 0.127±0.00 0.041±0.00 0.050±0.00 0.023±0.00 0.042±0.04 0.020±0.00 0.020±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008R7 CIL_0008R7_0001 VISTA 3:137341981-137943122
CIL_0007YL CIL_0007YL_0001 VISTA 3:137620069-138221266

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 2036
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 2025
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 1805
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 1330
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 1232
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 937
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 420
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 411
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 411

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