C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyl aminopeptidase (aminopeptidase B)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486058 RNPEPL1-002 ENSG00000142327 9606 + 2:240568861-240578727 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000486058
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000486058 7.748±0.00 17.989±0.00 5.604±0.00 5.235±3.59 0.941±0.00 8.079±7.18 10.294±0.00 14.279±0.00 9.917±2.45 9.624±0.00 12.269±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AE CIL_0009AE_0001 VISTA 2:240068562-240673577
CIL_0004UD CIL_0004UD_0002 CGP 2:240435671-240569209
CIL_0003MW CIL_0003MW_0001 CGP 2:240479422-240569209
CIL_0003MH CIL_0003MH_0001 CGP 2:240560054-240581372
CIL_0003NU CIL_0003NU_0001 CGP 2:240565804-240617705

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027487 Rnpepl1-001 protein_coding Mus_musculus 0 1459
ENSMUST00000179854 Rnpepl1-002 retained_intron Mus_musculus 0 1033
ENSMUST00000179127 Rnpepl1-004 protein_coding Mus_musculus 0 976
ENSMUST00000178816 Rnpepl1-003 retained_intron Mus_musculus 0 939
ENSMUST00000178662 Rnpepl1-012 retained_intron Mus_musculus 0 728
ENSMUST00000178778 Rnpepl1-010 retained_intron Mus_musculus 0 684
ENSMUST00000178116 Rnpepl1-008 nonsense_mediated_decay Mus_musculus 0 667
ENSMUST00000179531 Rnpepl1-005 nonsense_mediated_decay Mus_musculus 0 449
ENSMUST00000179993 Rnpepl1-007 protein_coding Mus_musculus 0 429
ENSMUST00000179837 Rnpepl1-011 protein_coding Mus_musculus 0 425
ENSMUST00000178361 Rnpepl1-009 retained_intron Mus_musculus 0 353
ENSMUST00000180306 Rnpepl1-006 retained_intron Mus_musculus 0 219

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