C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486414 PPIAP19-001 ENSG00000228169 9606 - 10:114690143-114690634 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryENST00000486414
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000486414 0.032±0.00 0.199±0.00 0.036±0.00 0.454±0.42 2.775±0.00 1.100±1.04 0.168±0.00 0.735±0.00 0.147±0.00 0.183±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001R6 CIL_0001R6_0002 CGP 10:114431113-114899832

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 597
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 573
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 562
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 558
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 545
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 545
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 518
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 281

Loading