C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486670 ARHGEF11-005 ENSG00000132694 9606 - 1:156955724-156963766 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverOvaryENST00000486670
Transcript ID Colon Heart Kidney Liver Ovary
ENST00000486670 7.208±0.00 3.343±0.00 2.456±0.00 5.171±0.00 14.444±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152006 Arhgef11-003 nonsense_mediated_decay Mus_musculus 0 911
ENSMUST00000039476 Arhgef11-001 protein_coding Mus_musculus 0 911
ENSMUST00000129113 Arhgef11-002 protein_coding Mus_musculus 0 896
ENSMUST00000142799 Arhgef11-005 retained_intron Mus_musculus 0 311

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