C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152006 Arhgef11-003 ENSMUSG00000041977 10090 + 3:87618101-87738034 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyMuscleOvaryPlacentaENSMUST00000152006
Transcript ID Breast Kidney Muscle Ovary Placenta
ENSMUST00000152006 3.354±0.00 4.417±0.00 1.234±0.00 6.206±0.48 6.829±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361409 ARHGEF11-002 protein_coding Homo_sapiens 0 2359
ENST00000368194 ARHGEF11-001 protein_coding Homo_sapiens 0 2359
ENST00000461678 ARHGEF11-006 processed_transcript Homo_sapiens 0 540
ENST00000483682 ARHGEF11-004 processed_transcript Homo_sapiens 0 468
ENST00000486670 ARHGEF11-005 processed_transcript Homo_sapiens 0 911
ENST00000487682 ARHGEF11-003 processed_transcript Homo_sapiens 0 900
ENST00000492592 ARHGEF11-007 processed_transcript Homo_sapiens 0 322

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