C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SATB homeobox 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000487699  |
SATB1-010 |
ENSG00000182568 |
9606 | - |
3:18420685-18438734  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004HQ | CIL_0004HQ_0001 | CGP | 3:17157162-18445588 |
| CIL_0007OK | CIL_0007OK_0001 | UCNEbase | 3:17286171-18992888 |
| CIL_000816 | CIL_000816_0001 | VISTA | 3:17827870-18428745 |
| CIL_0004HR | CIL_0004HR_0001 | CGP | 3:18345387-19535646 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000129667
|
Satb1-003 | protein_coding | Mus_musculus | 0 | 481 |
|
ENSMUST00000169480
|
Satb1-201 | protein_coding | Mus_musculus | 0 | 466 |
|
ENSMUST00000146414
|
Satb1-006 | retained_intron | Mus_musculus | 0 | 422 |
|
ENSMUST00000140979
|
Satb1-004 | protein_coding | Mus_musculus | 0 | 398 |
|
ENSMUST00000144331
|
Satb1-001 | protein_coding | Mus_musculus | 0 | 396 |
|
ENSMUST00000124222
|
Satb1-008 | protein_coding | Mus_musculus | 0 | 394 |
|
ENSMUST00000129205
|
Satb1-011 | protein_coding | Mus_musculus | 0 | 394 |
|
ENSMUST00000152830
|
Satb1-002 | protein_coding | Mus_musculus | 0 | 394 |
|
ENSMUST00000176669
|
Satb1-012 | protein_coding | Mus_musculus | 0 | 394 |
|
ENSMUST00000133574
|
Satb1-005 | protein_coding | Mus_musculus | 0 | 394 |
|
ENSMUST00000148559
|
Satb1-010 | protein_coding | Mus_musculus | 2e-36 | 156 |
|
ENSMUST00000140727
|
Satb1-013 | processed_transcript | Mus_musculus | 1e-33 | 147 |
|
ENSMUST00000156051
|
Satb1-007 | retained_intron | Mus_musculus | 8e-26 | 121 |
