C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SATB homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487699 SATB1-010 ENSG00000182568 9606 - 3:18420685-18438734 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HQ CIL_0004HQ_0001 CGP 3:17157162-18445588
CIL_0007OK CIL_0007OK_0001 UCNEbase 3:17286171-18992888
CIL_000816 CIL_000816_0001 VISTA 3:17827870-18428745
CIL_0004HR CIL_0004HR_0001 CGP 3:18345387-19535646

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129667 Satb1-003 protein_coding Mus_musculus 0 481
ENSMUST00000169480 Satb1-201 protein_coding Mus_musculus 0 466
ENSMUST00000146414 Satb1-006 retained_intron Mus_musculus 0 422
ENSMUST00000140979 Satb1-004 protein_coding Mus_musculus 0 398
ENSMUST00000144331 Satb1-001 protein_coding Mus_musculus 0 396
ENSMUST00000124222 Satb1-008 protein_coding Mus_musculus 0 394
ENSMUST00000129205 Satb1-011 protein_coding Mus_musculus 0 394
ENSMUST00000152830 Satb1-002 protein_coding Mus_musculus 0 394
ENSMUST00000176669 Satb1-012 protein_coding Mus_musculus 0 394
ENSMUST00000133574 Satb1-005 protein_coding Mus_musculus 0 394
ENSMUST00000148559 Satb1-010 protein_coding Mus_musculus 2e-36 156
ENSMUST00000140727 Satb1-013 processed_transcript Mus_musculus 1e-33 147
ENSMUST00000156051 Satb1-007 retained_intron Mus_musculus 8e-26 121

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