C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488511 RP11-7F17.1-001 ENSG00000243225 9606 + 14:76968683-76969145 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLungMuscleTestisENST00000488511
Transcript ID Adrenal Colon Heart Kidney Lung Muscle Testis
ENST00000488511 0.086±0.00 0.290±0.00 0.078±0.00 0.355±0.00 0.082±0.00 0.332±0.00 0.080±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554
CIL_000867 CIL_000867_0001 VISTA 14:76636452-77239164
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_00076Y CIL_00076Y_0001 CGP 14:76826372-77028699

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 279
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 268
ENSMUST00000172206 Gm17511-201 protein_coding Mus_musculus 0 255
ENSMUST00000117047 Gm12165-001 processed_pseudogene Mus_musculus 0 219

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