C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117047 Gm12165-001 ENSMUSG00000082870 10090 + 11:46036440-46036781 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117047
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117047 0.998±0.59 0.343±0.01 0.135±0.00 0.092±0.00 0.675±0.21 0.476±0.18 1.752±0.93 0.179±0.02 0.343±0.23 0.874±0.09 0.223±0.00 1.062±0.41 0.030±0.00 0.979±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0002 VISTA 11:45901358-46503267

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260379 RPLP1-001 protein_coding Homo_sapiens 0 313
ENST00000357790 RPLP1-002 protein_coding Homo_sapiens 0 198
ENST00000398740 RP11-120J4.1-001 processed_pseudogene Homo_sapiens 7.9874e-44 180
ENST00000405359 AC016739.2-001 processed_pseudogene Homo_sapiens 0 307
ENST00000453002 RPLP1P11-001 processed_pseudogene Homo_sapiens 0 263
ENST00000470649 TTC19-010 protein_coding Homo_sapiens 0 263
ENST00000473923 RP11-54C4.1-001 transcribed_processed_pseudogene Homo_sapiens 0 250
ENST00000487304 RPLP1-003 retained_intron Homo_sapiens 0 200
ENST00000488122 RPLP1-004 retained_intron Homo_sapiens 0 270
ENST00000488511 RP11-7F17.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000518134 RP11-54C4.1-002 processed_transcript Homo_sapiens 0 250

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