C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10073
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073722 Gm10073-201 ENSMUSG00000060019 10090 - 8:106572966-106573461 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073722
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073722 65.390±13.09 15.760±2.21 11.817±2.24 10.468±2.32 83.478±33.65 41.370±16.55 23.094±2.38 33.170±11.12 31.736±32.61 50.480±5.50 0.968±0.57 120.153±82.55 3.188±1.67 15.934±7.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260379 RPLP1-001 protein_coding Homo_sapiens 0 555
ENST00000357790 RPLP1-002 protein_coding Homo_sapiens 0 267
ENST00000398740 RP11-120J4.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000405359 AC016739.2-001 processed_pseudogene Homo_sapiens 0 422
ENST00000407767 RP3-406A7.3-001 transcribed_processed_pseudogene Homo_sapiens 0 189
ENST00000437248 RP11-435F13.2-001 processed_pseudogene Homo_sapiens 0 322
ENST00000453002 RPLP1P11-001 processed_pseudogene Homo_sapiens 0 346
ENST00000470649 TTC19-010 protein_coding Homo_sapiens 0 387
ENST00000473923 RP11-54C4.1-001 transcribed_processed_pseudogene Homo_sapiens 0 331
ENST00000487304 RPLP1-003 retained_intron Homo_sapiens 0 292
ENST00000488122 RPLP1-004 retained_intron Homo_sapiens 0 361
ENST00000488511 RP11-7F17.1-001 processed_pseudogene Homo_sapiens 0 268
ENST00000490423 RP11-395C3.1-001 processed_pseudogene Homo_sapiens 0 187
ENST00000518134 RP11-54C4.1-002 processed_transcript Homo_sapiens 0 388
ENST00000560274 RPLP1-006 protein_coding Homo_sapiens 5e-20 100

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