C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family A (ABC1), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488535 ABCA2-014 ENSG00000107331 9606 - 9:137012325-137018211 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverMuscleOvaryENST00000488535
Transcript ID Bladder Breast Colon Heart Liver Muscle Ovary
ENST00000488535 1.586±0.00 0.589±0.00 0.582±0.00 0.272±0.00 0.450±0.00 0.534±0.00 1.031±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102919 Abca2-001 protein_coding Mus_musculus 0 3668
ENSMUST00000150550 Abca2-002 processed_transcript Mus_musculus 0 399
ENSMUST00000143075 Abca2-003 processed_transcript Mus_musculus 4e-36 158

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