C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23a pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489946 RPL23AP10-001 ENSG00000240051 9606 - 14:96456576-96457041 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryTestisENST00000489946
Transcript ID Lung Ovary Testis
ENST00000489946 0.072±0.00 0.272±0.00 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HH CIL_0003HH_0001 CGP 14:96363452-96489427
CIL_0003HI CIL_0003HI_0001 CGP 14:96392111-96567111

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118798 Gm7312-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000120350 Rpl23a-ps13-001 processed_pseudogene Mus_musculus 1e-24 117
ENSMUST00000118608 Gm11935-001 processed_pseudogene Mus_musculus 0.00000001 64

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