C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: opsin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490673 OPN3-003 ENSG00000054277 9606 - 1:241593602-241640355 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000490673
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000490673 3.052±0.00 2.536±0.00 6.128±0.00 1.147±0.00 1.325±0.14 0.639±0.51 8.826±0.00 2.927±2.45 1.837±0.12 2.667±1.50 15.147±1.05 2.996±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HM CIL_0000HM_0001 CGP 1:241497603-241595642
CIL_0000I7 CIL_0000I7_0001 CGP 1:241532134-241677376
CIL_0003AP CIL_0003AP_0001 CGP 1:241590102-241677376

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027809 Opn3-001 protein_coding Mus_musculus 0 484

Loading