C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000490917  |
BAP1-004 |
ENSG00000163930 |
9606 | - |
3:52407173-52409951  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007WP | CIL_0007WP_0001 | VISTA | 3:52127966-52731115 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004843 | IEA | ubiquitin-specific protease activity |
| GO:0005622 | IEA | intracellular |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000190788
|
Bap1-002 | retained_intron | Mus_musculus | 0 | 255 |
|
ENSMUST00000022458
|
Bap1-001 | protein_coding | Mus_musculus | 0 | 255 |
|
ENSMUST00000188453
|
Bap1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 246 |
|
ENSMUST00000188714
|
Bap1-004 | retained_intron | Mus_musculus | 9.94922e-44 | 180 |
|
ENSMUST00000189834
|
Bap1-003 | retained_intron | Mus_musculus | 1e-29 | 134 |
