C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Brca1 associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022458 Bap1-001 ENSMUSG00000021901 10090 + 14:31251450-31259944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022458 20.180±2.09 17.011±4.72 14.092±0.78 33.479±11.07 18.353±2.93 15.472±1.57 12.919±0.60 22.117±1.63 13.742±4.59 19.333±0.43 14.991±0.45 24.390±6.97 19.693±9.15 29.440±11.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 ISS regulation of cell growth
GO:0003682 ISS chromatin binding
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008285 ISA negative regulation of cell proliferation
GO:0016579 ISS protein deubiquitination
GO:0035517 ISS PR-DUB complex
GO:0035520 ISS monoubiquitinated protein deubiquitination
GO:0035522 ISS monoubiquitinated histone H2A deubiquitination
GO:0051726 ISS regulation of cell cycle
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296288 BAP1-010 protein_coding Homo_sapiens 0 1858
ENST00000460680 BAP1-001 protein_coding Homo_sapiens 0 2918
ENST00000466093 BAP1-013 retained_intron Homo_sapiens 0 507
ENST00000469613 BAP1-015 protein_coding Homo_sapiens 0 521
ENST00000470173 BAP1-016 protein_coding Homo_sapiens 0 712
ENST00000478368 BAP1-014 protein_coding Homo_sapiens 0 558
ENST00000483984 BAP1-009 retained_intron Homo_sapiens 0 599
ENST00000490804 BAP1-008 retained_intron Homo_sapiens 0 564
ENST00000490917 BAP1-004 nonsense_mediated_decay Homo_sapiens 0 255

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