C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synovial sarcoma translocation gene on chromosome 18-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492466 SS18L1-001 ENSG00000184402 9606 + 20:62163458-62180284 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000492466
Transcript ID Lung Muscle
ENST00000492466 1.323±0.00 3.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000134 CIL_000134_0001 CGP 20:62136735-62182484
CIL_0001DM CIL_0001DM_0001 CGP 20:62143795-62203568

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041126 Ss18l1-001 protein_coding Mus_musculus 0 780

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