C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trophinin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492706 TRO-003 ENSG00000067445 9606 + X:54924488-54931429 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000492706
Transcript ID Adrenal Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000492706 0.246±0.00 1.250±0.00 0.110±0.00 0.085±0.00 1.042±0.00 0.396±0.00 3.629±2.93 0.999±0.00 0.457±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112709 Tro-201 protein_coding Mus_musculus 0 641
ENSMUST00000087258 Tro-001 protein_coding Mus_musculus 0 641
ENSMUST00000163450 Tro-003 nonsense_mediated_decay Mus_musculus 0 630
ENSMUST00000169450 Tro-008 retained_intron Mus_musculus 0 630
ENSMUST00000164071 Tro-004 protein_coding Mus_musculus 0 630
ENSMUST00000163969 Tro-006 protein_coding Mus_musculus 0 630
ENSMUST00000087253 Tro-002 protein_coding Mus_musculus 0 630
ENSMUST00000151403 Tro-005 protein_coding Mus_musculus 0 630
ENSMUST00000171775 Tro-007 retained_intron Mus_musculus 0 593
ENSMUST00000145342 Maged2-004 retained_intron Mus_musculus 0 529
ENSMUST00000112697 Maged2-201 protein_coding Mus_musculus 0 346
ENSMUST00000026302 Maged2-011 protein_coding Mus_musculus 0 346
ENSMUST00000112700 Maged2-002 protein_coding Mus_musculus 0 346
ENSMUST00000112699 Maged2-001 protein_coding Mus_musculus 0 346
ENSMUST00000165192 Tro-009 retained_intron Mus_musculus 0 281

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