C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autocrine motility factor receptor, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492830 AMFR-002 ENSG00000159461 9606 - 16:56361560-56403117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492830
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492830 7.615±0.00 13.613±0.00 10.857±0.00 8.451±0.00 11.857±5.46 20.280±0.00 7.462±0.00 53.170±0.00 7.995±0.00 5.595±0.00 16.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00048U CIL_00048U_0001 CGP 16:56191390-56425538
CIL_00048T CIL_00048T_0001 CGP 16:56361452-56452199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053766 Amfr-001 protein_coding Mus_musculus 0 935
ENSMUST00000139702 Amfr-003 retained_intron Mus_musculus 0 656
ENSMUST00000137475 Amfr-004 processed_transcript Mus_musculus 0 327

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