C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: alpha tubulin acetyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493388 ATAT1-008 ENSG00000137343 9606 + 6:30626915-30640698 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungMuscleENST00000493388
Transcript ID Bladder Colon Lung Muscle
ENST00000493388 0.463±0.00 0.590±0.00 0.799±0.24 1.905±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141662 Atat1-004 protein_coding Mus_musculus 0 747
ENSMUST00000149277 Atat1-003 protein_coding Mus_musculus 0 747
ENSMUST00000061052 Atat1-001 protein_coding Mus_musculus 0 747
ENSMUST00000056034 Atat1-005 protein_coding Mus_musculus 0 676
ENSMUST00000077494 Atat1-002 protein_coding Mus_musculus 0 676
ENSMUST00000140990 Atat1-006 retained_intron Mus_musculus 0 647
ENSMUST00000141132 Atat1-009 protein_coding Mus_musculus 0 627
ENSMUST00000127959 Atat1-007 processed_transcript Mus_musculus 0 610
ENSMUST00000137069 Atat1-010 processed_transcript Mus_musculus 0 556
ENSMUST00000137182 Atat1-008 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000130309 Atat1-012 retained_intron Mus_musculus 0 414
ENSMUST00000126744 Atat1-013 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000151009 Atat1-011 retained_intron Mus_musculus 0 281
ENSMUST00000174436 Atat1-016 retained_intron Mus_musculus 0 241

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