C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mitogen-activated protein kinase kinase kinase kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493428 MAP4K2-011 ENSG00000168067 9606 - 11:64800182-64801813 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonOvaryPlacentaENST00000493428
Transcript ID Bladder Colon Ovary Placenta
ENST00000493428 0.683±0.00 1.673±0.00 5.758±0.00 8.858±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JE CIL_0005JE_0002 CGP 11:64788818-64811294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152259 Map4k2-004 retained_intron Mus_musculus 0 623
ENSMUST00000124556 Map4k2-002 nonsense_mediated_decay Mus_musculus 0 623
ENSMUST00000025897 Map4k2-001 protein_coding Mus_musculus 0 623
ENSMUST00000133696 Map4k2-003 retained_intron Mus_musculus 0 580
ENSMUST00000123468 Map4k2-009 retained_intron Mus_musculus 0 473
ENSMUST00000155569 Map4k2-008 processed_transcript Mus_musculus 0 473
ENSMUST00000142496 Map4k2-019 nonsense_mediated_decay Mus_musculus 0 464
ENSMUST00000124333 Map4k2-020 retained_intron Mus_musculus 0 353
ENSMUST00000130382 Map4k2-018 protein_coding Mus_musculus 0 215
ENSMUST00000134307 Map4k2-012 retained_intron Mus_musculus 2e-32 143
ENSMUST00000148410 Map4k2-011 retained_intron Mus_musculus 3e-26 122
ENSMUST00000127809 Map4k2-021 processed_transcript Mus_musculus 5e-18 95
ENSMUST00000152349 Map4k2-007 nonsense_mediated_decay Mus_musculus 0.0000000003 69

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