C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 1 open reading frame 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493514 C1orf52-004 ENSG00000162642 9606 - 1:85257443-85259633 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungPlacentaENST00000493514
Transcript ID Bladder Lung Placenta
ENST00000493514 0.228±0.00 9.213±0.00 3.552±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QR CIL_0007QR_0001 VISTA 1:84924957-85525799

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134575 2410004B18Rik-002 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000152783 2410004B18Rik-004 nonsense_mediated_decay Mus_musculus 0 490
ENSMUST00000189656 2410004B18Rik-008 retained_intron Mus_musculus 0 257

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