C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2410004B18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134575 2410004B18Rik-002 ENSMUSG00000036873 10090 + 3:145938042-145944827 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134575 2.398±1.55 3.730±0.97 3.270±0.00 1.331±0.00 2.502±0.98 2.651±0.39 0.738±0.05 1.510±0.56 1.163±0.72 2.846±0.33 0.726±0.00 3.005±1.17 3.533±0.95 2.225±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QR CIL_0007QR_0002 VISTA 3:145664099-146264929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294661 C1orf52-003 processed_transcript Homo_sapiens 0 905
ENST00000471115 C1orf52-001 protein_coding Homo_sapiens 0 549
ENST00000493514 C1orf52-004 processed_transcript Homo_sapiens 0 542

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