C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 4, regulatory subunit 1-like (pseudogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493688 PPP4R1L-003 ENSG00000124224 9606 - 20:58237919-58309439 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverENST00000493688
Transcript ID Breast Liver
ENST00000493688 1.043±0.00 0.606±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028J CIL_00028J_0001 CGP 20:58218495-58367507

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141051 Ppp4r1l-ps-001 processed_transcript Mus_musculus 5e-19 100
ENSMUST00000142320 Ppp4r1l-ps-004 processed_transcript Mus_musculus 2e-18 99
ENSMUST00000153162 Ppp4r1l-ps-003 retained_intron Mus_musculus 2e-18 99
ENSMUST00000151763 Ppp4r1l-ps-002 processed_transcript Mus_musculus 2e-18 99
ENSMUST00000133185 Ppp4r1l-ps-008 retained_intron Mus_musculus 0.000000000009 77
ENSMUST00000148111 Ppp4r1l-ps-007 processed_transcript Mus_musculus 0.000000000009 77
ENSMUST00000148213 Ppp4r1l-ps-009 retained_intron Mus_musculus 0.00000000003 75

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