C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493814 C1orf43-005 ENSG00000143612 9606 - 1:154207540-154212730 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverMuscleENST00000493814
Transcript ID Brain Breast Colon Heart Liver Muscle
ENST00000493814 64.474±0.00 13.334±0.00 11.791±0.00 17.686±0.00 23.285±0.00 44.783±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161918 4933434E20Rik-002 nonsense_mediated_decay Mus_musculus 0 405
ENSMUST00000160640 4933434E20Rik-001 protein_coding Mus_musculus 0 403
ENSMUST00000159064 4933434E20Rik-006 protein_coding Mus_musculus 0 403
ENSMUST00000068798 4933434E20Rik-003 protein_coding Mus_musculus 0 401
ENSMUST00000168894 Gm7664-201 processed_pseudogene Mus_musculus 0 337
ENSMUST00000099450 Gm6478-201 processed_pseudogene Mus_musculus 0 326
ENSMUST00000161874 4933434E20Rik-009 retained_intron Mus_musculus 0 279
ENSMUST00000162114 4933434E20Rik-005 protein_coding Mus_musculus 0 279
ENSMUST00000029552 4933434E20Rik-004 protein_coding Mus_musculus 0 279
ENSMUST00000162390 4933434E20Rik-010 retained_intron Mus_musculus 0 206

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