C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptophysin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494396 SYP-005 ENSG00000102003 9606 - X:49197017-49200195 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderKidneyTestisENST00000494396
Transcript ID Adrenal Bladder Kidney Testis
ENST00000494396 0.204±0.00 0.032±0.00 0.086±0.00 0.156±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149795 Syp-002 retained_intron Mus_musculus 4.2039e-45 187
ENSMUST00000069520 Syp-001 protein_coding Mus_musculus 4.2039e-45 187
ENSMUST00000137515 Syp-005 retained_intron Mus_musculus 5e-24 117
ENSMUST00000150572 Syp-004 processed_transcript Mus_musculus 2e-22 111
ENSMUST00000128890 Syp-003 protein_coding Mus_musculus 2e-22 111

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