C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494882 RP11-681N23.1-001 ENSG00000243779 9606 - 18:13919603-13919923 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonLungOvaryPlacentaENST00000494882
Transcript ID Adipose Brain Colon Lung Ovary Placenta
ENST00000494882 0.048±0.00 0.105±0.00 0.048±0.00 0.150±0.00 0.274±0.00 0.180±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113211 Rpl36a-001 protein_coding Mus_musculus 0 433
ENSMUST00000172023 Rpl36a-003 retained_intron Mus_musculus 0 429
ENSMUST00000170828 Rpl36a-004 nonsense_mediated_decay Mus_musculus 0 425
ENSMUST00000149857 Rpl36a-005 retained_intron Mus_musculus 0 422
ENSMUST00000142299 Gm13194-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000169457 Rpl36a-006 retained_intron Mus_musculus 0 219

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