C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13194
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142299 Gm13194-001 ENSMUSG00000086670 10090 + 2:4942174-4942484 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000142299
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000142299 0.259±0.01 0.565±0.14 0.723±0.78 0.347±0.00 0.539±0.00 0.233±0.01 0.928±0.22 0.320±0.18 0.822±0.33 2.057±1.22 0.740±0.43 0.226±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763
CIL_00015C CIL_00015C_0002 CGP 2:4919019-4985748

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372849 RPL36A-007 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000392994 RPL36A-004 protein_coding Homo_sapiens 0 385
ENST00000399253 RP3-507I15.1-001 processed_pseudogene Homo_sapiens 0 235
ENST00000409170 RPL36A-HNRNPH2-002 protein_coding Homo_sapiens 0 383
ENST00000409338 RPL36A-HNRNPH2-001 protein_coding Homo_sapiens 0 211
ENST00000413334 AC011933.2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000413542 RP4-612C19.1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000418637 RP1-128O3.6-001 processed_pseudogene Homo_sapiens 8.96831e-44 180
ENST00000427805 RPL36A-002 protein_coding Homo_sapiens 0 388
ENST00000435130 RP11-84O12.3-001 processed_pseudogene Homo_sapiens 0 257
ENST00000435770 RPL36AP6-001 processed_pseudogene Homo_sapiens 0 239
ENST00000438468 AC004938.5-001 processed_pseudogene Homo_sapiens 0 241
ENST00000441658 RP11-77O7.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000444514 RPL36AP15-001 processed_pseudogene Homo_sapiens 3e-38 161
ENST00000445859 RPL36AP39-001 processed_pseudogene Homo_sapiens 0 311
ENST00000451203 AC104843.3-001 processed_pseudogene Homo_sapiens 0 320
ENST00000454621 AC104308.2-001 processed_pseudogene Homo_sapiens 0 246
ENST00000457490 RPL36AP13-001 processed_pseudogene Homo_sapiens 0 324
ENST00000459748 RP11-466H18.1-001 processed_pseudogene Homo_sapiens 0 388
ENST00000461005 RP4-800G7.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000465340 RPL36A-003 retained_intron Homo_sapiens 0 213
ENST00000465744 RPL36A-010 retained_intron Homo_sapiens 0 385
ENST00000466725 CTC-550B14.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000467217 RP11-51L5.1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000471855 RPL36A-001 protein_coding Homo_sapiens 0 385
ENST00000471982 RP11-1085N6.1-001 processed_pseudogene Homo_sapiens 0 305
ENST00000476382 RPL36AP26-001 processed_pseudogene Homo_sapiens 0 337
ENST00000484625 RP11-477G18.2-001 processed_pseudogene Homo_sapiens 0 285
ENST00000485172 RP11-356M17.1-001 processed_pseudogene Homo_sapiens 0 226
ENST00000487216 RPL36AP51-001 processed_pseudogene Homo_sapiens 0 313
ENST00000489407 RPL36A-011 retained_intron Homo_sapiens 2.94273e-44 182
ENST00000491307 RP11-83J16.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000491851 RPL36A-008 retained_intron Homo_sapiens 1e-29 134
ENST00000492041 RP11-85G20.2-001 processed_pseudogene Homo_sapiens 0 235
ENST00000494882 RP11-681N23.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000553110 RPL36A-012 protein_coding Homo_sapiens 0 388
ENST00000614077 RPL36A-201 protein_coding Homo_sapiens 0 388

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