C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495139 RP11-562A8.1-001 ENSG00000242737 9606 + 15:50466738-50467096 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryTestisENST00000495139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000495139 0.036±0.00 0.149±0.00 0.803±0.00 0.184±0.00 0.397±0.36 1.274±0.00 0.062±0.03 0.111±0.00 1.231±0.00 0.514±0.33 0.129±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070V CIL_00070V_0001 CGP 15:50275392-50514419
CIL_0002E8 CIL_0002E8_0001 CGP 15:50424380-50546708

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138502 Rps20-001 protein_coding Mus_musculus 0 351
ENSMUST00000103009 Rps20-002 retained_intron Mus_musculus 0 350
ENSMUST00000130128 Rps20-003 retained_intron Mus_musculus 0 287

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