C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ADAM metallopeptidase with thrombospondin type 1 motif, 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495234 ADAMTS13-007 ENSG00000160323 9606 + 9:133422324-133449956 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyLungOvaryENST00000495234
Transcript ID Adipose Kidney Lung Ovary
ENST00000495234 0.036±0.00 0.991±0.00 0.121±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KH CIL_0000KH_0001 CGP 9:133376367-133418096
CIL_0006DF CIL_0006DF_0001 CGP 9:133406059-133459402
CIL_0006DA CIL_0006DA_0001 CGP 9:133414358-133470848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102891 Adamts13-001 protein_coding Mus_musculus 0 924
ENSMUST00000014996 Adamts13-002 protein_coding Mus_musculus 0 924
ENSMUST00000128064 Ndufb2-003 retained_intron Mus_musculus 0.00005 55

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