C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495461 SELK-001 ENSG00000113811 9606 - 3:53884410-53891988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000495461
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000495461 3.232±0.00 4.162±0.00 0.380±0.00 4.582±3.03 2.131±1.08 1.608±1.12 3.018±2.13 6.148±0.00 2.702±0.70 3.374±2.52 1.669±0.82 3.400±1.81 4.161±0.61 3.522±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006816 IEA calcium ion transport
GO:0010742 IEA macrophage derived foam cell differentiation
GO:0018345 IEA protein palmitoylation
GO:0030335 IEA positive regulation of cell migration
GO:0042102 IEA positive regulation of T cell proliferation
GO:0045728 IEA respiratory burst after phagocytosis
GO:0051223 IEA regulation of protein transport
GO:2000406 IEA positive regulation of T cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112268 Selk-001 protein_coding Mus_musculus 0 628
ENSMUST00000133229 Selk-002 processed_transcript Mus_musculus 0 361
ENSMUST00000071632 Gm20563-201 processed_pseudogene Mus_musculus 0 316

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