C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphoseryl-tRNA kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496079 PSTK-007 ENSG00000179988 9606 + 10:122983290-122994929 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DB CIL_0008DB_0001 VISTA 10:122767938-123370218
CIL_0009A3 CIL_0009A3_0001 VISTA 10:122792297-123393555
CIL_0007QE CIL_0007QE_0001 VISTA 10:122843411-123445122
CIL_0001B9 CIL_0001B9_0001 CGP 10:122910701-122954403
CIL_0002JF CIL_0002JF_0001 CGP 10:122930903-122997513
CIL_00011P CIL_00011P_0001 CGP 10:122954381-123008817

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124672 Pstk-003 retained_intron Mus_musculus 0 593
ENSMUST00000075610 Pstk-001 protein_coding Mus_musculus 0 593
ENSMUST00000145114 Pstk-002 nonsense_mediated_decay Mus_musculus 0 538
ENSMUST00000128092 Pstk-007 processed_transcript Mus_musculus 0 244
ENSMUST00000133284 Pstk-006 processed_transcript Mus_musculus 0 241
ENSMUST00000148533 Pstk-005 retained_intron Mus_musculus 0 237

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