C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoseryl-tRNA kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075610 Pstk-001 ENSMUSG00000063179 10090 + 7:131371141-131387839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075610
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075610 5.784±0.42 9.915±2.21 3.490±0.33 4.849±1.70 6.419±2.80 4.563±1.40 7.545±1.53 5.141±1.42 2.894±0.59 11.470±0.85 9.098±3.11 3.271±2.51 1.593±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0008DB CIL_0008DB_0002 VISTA 7:131163946-131765852
CIL_0009A3 CIL_0009A3_0002 VISTA 7:131196657-131797909
CIL_0007QE CIL_0007QE_0002 VISTA 7:131249727-131851322
CIL_0002JF CIL_0002JF_0002 CGP 7:131342718-131387839
CIL_00011P CIL_00011P_0002 CGP 7:131371141-131410521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IDA tRNA binding
GO:0001514 IDA selenocysteine incorporation
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0016301 IDA kinase activity
GO:0016310 IEA phosphorylation
GO:0097056 IEA selenocysteinyl-tRNA(Sec) biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368887 PSTK-001 protein_coding Homo_sapiens 0 717
ENST00000405485 PSTK-201 protein_coding Homo_sapiens 0 717
ENST00000406217 PSTK-002 protein_coding Homo_sapiens 0 950
ENST00000465232 PSTK-006 processed_transcript Homo_sapiens 0 418
ENST00000483455 PSTK-005 processed_transcript Homo_sapiens 0 553
ENST00000483755 PSTK-008 processed_transcript Homo_sapiens 0 425
ENST00000493461 PSTK-003 retained_intron Homo_sapiens 0 518
ENST00000496079 PSTK-007 processed_transcript Homo_sapiens 0 593
ENST00000497219 PSTK-004 processed_transcript Homo_sapiens 0 693

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