C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetraspanin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496771 TSPAN6-003 ENSG00000000003 9606 - X:100632541-100636689 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENST00000496771
Transcript ID Muscle Ovary Placenta Testis
ENST00000496771 0.288±0.00 28.288±0.00 9.668±0.00 44.319±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B5 CIL_0007B5_0001 CGP X:100584802-100639991
CIL_0007B6 CIL_0007B6_0001 CGP X:100627109-100671299

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087557 Tspan6-001 protein_coding Mus_musculus 0 582
ENSMUST00000176718 Tspan6-003 protein_coding Mus_musculus 0 424
ENSMUST00000177468 Tspan6-002 processed_transcript Mus_musculus 0 353
ENSMUST00000176641 Tspan6-004 protein_coding Mus_musculus 0 350

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