C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serine/arginine repetitive matrix 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000496882  |
SRRM1-016 |
ENSG00000133226 |
9606 | + |
1:24652497-24662804  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ZX | CIL_0007ZX_0001 | VISTA | 1:24547215-25148615 |
| CIL_0002GR | CIL_0002GR_0002 | CGP | 1:24631716-24844324 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000030613
|
Srrm1-002 | protein_coding | Mus_musculus | 0 | 994 |
|
ENSMUST00000136342
|
Srrm1-015 | protein_coding | Mus_musculus | 0 | 994 |
|
ENSMUST00000105861
|
Srrm1-003 | protein_coding | Mus_musculus | 0 | 994 |
|
ENSMUST00000084846
|
Srrm1-001 | protein_coding | Mus_musculus | 0 | 913 |
|
ENSMUST00000150619
|
Srrm1-007 | retained_intron | Mus_musculus | 0 | 894 |
|
ENSMUST00000151251
|
Srrm1-011 | retained_intron | Mus_musculus | 0 | 540 |
|
ENSMUST00000131301
|
Srrm1-009 | nonsense_mediated_decay | Mus_musculus | 0 | 435 |
|
ENSMUST00000162914
|
Srrm1-014 | retained_intron | Mus_musculus | 0 | 409 |
