C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497406 RPS6P22-001 ENSG00000244390 9606 + 12:59020169-59020894 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleTestisENST00000497406
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Testis
ENST00000497406 0.074±0.00 0.059±0.00 0.050±0.00 0.039±0.00 0.063±0.01 0.018±0.00 0.039±0.00 0.018±0.00 0.035±0.00 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V1 CIL_0007V1_0001 VISTA 12:58667849-59270737
CIL_0008TE CIL_0008TE_0001 VISTA 12:58766409-59368586

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100510 Gm16409-201 processed_pseudogene Mus_musculus 0 496
ENSMUST00000121853 Gm11263-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000079841 Rps6-ps2-201 processed_pseudogene Mus_musculus 0 446

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