C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgin, RAB6-interacting
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498166 GORAB-004 ENSG00000120370 9606 + 1:170532151-170553446 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000498166
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000498166 1.983±0.00 0.084±0.00 0.605±0.00 0.452±0.00 0.298±0.00 0.282±0.00 0.152±0.00 0.227±0.00 0.947±0.22 1.345±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000280 CIL_000280_0002 CGP 1:170146001-170553446
CIL_000284 CIL_000284_0002 CGP 1:170532129-170739419

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045138 Gorab-001 protein_coding Mus_musculus 0 797
ENSMUST00000185299 Gorab-003 retained_intron Mus_musculus 0 422
ENSMUST00000186402 Gorab-002 nonsense_mediated_decay Mus_musculus 0 405

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