C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003049 Med25-201 ENSMUSG00000002968 10090 - 7:44879391-44892397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003049
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003049 22.031±2.63 72.904±13.19 18.502±1.96 58.927±48.83 27.719±12.22 50.450±5.32 17.932±4.44 21.632±4.20 18.613±6.47 16.131±2.47 17.988±2.52 44.773±18.28 14.644±8.66 30.389±15.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0035563 IEA positive regulation of chromatin binding
GO:0042974 IPI retinoic acid receptor binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046965 IPI retinoid X receptor binding
GO:0048147 IEA negative regulation of fibroblast proliferation
GO:0071158 IEA positive regulation of cell cycle arrest
GO:2001178 IEA positive regulation of mediator complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312865 MED25-001 protein_coding Homo_sapiens 0 2483
ENST00000391842 PTOV1-201 protein_coding Homo_sapiens 0 433
ENST00000498792 RP11-174O3.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000538643 MED25-012 protein_coding Homo_sapiens 0 1666
ENST00000593636 MED25-003 retained_intron Homo_sapiens 0 374
ENST00000593767 MED25-023 protein_coding Homo_sapiens 0 678
ENST00000594151 PTOV1-011 protein_coding Homo_sapiens 0 433
ENST00000594165 PTOV1-013 processed_transcript Homo_sapiens 0 433
ENST00000594640 PTOV1-016 processed_transcript Homo_sapiens 0 220
ENST00000594998 MED25-009 retained_intron Homo_sapiens 0 776
ENST00000595185 MED25-016 protein_coding Homo_sapiens 0 717
ENST00000595934 PTOV1-009 retained_intron Homo_sapiens 0 204
ENST00000596424 PTOV1-019 retained_intron Homo_sapiens 4e-30 135
ENST00000597793 PTOV1-010 retained_intron Homo_sapiens 0 202
ENST00000598325 PTOV1-004 processed_transcript Homo_sapiens 0 433
ENST00000598632 PTOV1-008 retained_intron Homo_sapiens 0 235
ENST00000599722 MED25-021 retained_intron Homo_sapiens 0 239
ENST00000599732 PTOV1-006 protein_coding Homo_sapiens 0 433
ENST00000600105 PTOV1-018 processed_transcript Homo_sapiens 0 202
ENST00000600603 PTOV1-002 protein_coding Homo_sapiens 0 433
ENST00000600793 PTOV1-017 protein_coding Homo_sapiens 0 191
ENST00000601501 PTOV1-012 retained_intron Homo_sapiens 0 235
ENST00000601612 PTOV1-001 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000601638 PTOV1-003 protein_coding Homo_sapiens 0 433
ENST00000601675 PTOV1-007 protein_coding Homo_sapiens 0 433
ENST00000612791 MED25-201 protein_coding Homo_sapiens 0 739
ENST00000612854 MED25-202 protein_coding Homo_sapiens 0 547
ENST00000617849 MED25-203 protein_coding Homo_sapiens 0 1511
ENST00000618715 MED25-204 protein_coding Homo_sapiens 0 1493
ENST00000620467 MED25-205 protein_coding Homo_sapiens 0 1013
ENST00000622046 MED25-206 protein_coding Homo_sapiens 0 778
ENST00000622402 MED25-207 protein_coding Homo_sapiens 0 534

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