C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000499314 RP11-1277A3.2-003 ENSG00000246596 9606 - 5:177619059-177631535 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499314
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499314 1.029±0.00 0.840±0.23 0.272±0.00 0.157±0.00 0.566±0.30 0.468±0.02 0.727±0.58 0.589±0.21 1.000±0.00 0.564±0.00 0.235±0.13 2.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121401 Simc1-001 protein_coding Mus_musculus 0 601
ENSMUST00000118072 Simc1-002 protein_coding Mus_musculus 0 448
ENSMUST00000150011 Simc1-006 retained_intron Mus_musculus 9e-28 128
ENSMUST00000138869 Simc1-003 nonsense_mediated_decay Mus_musculus 9e-28 128

Loading