C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO-interacting motifs containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121401 Simc1-001 ENSMUSG00000043183 10090 + 13:54503779-54551290 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverOvaryPlacentaTestisENSMUST00000121401
Transcript ID Adipose Adrenal Brain Breast Liver Ovary Placenta Testis
ENSMUST00000121401 5.564±0.63 9.717±1.36 6.223±3.25 3.775±0.19 2.002±0.62 7.161±3.45 2.246±1.21 8.241±3.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0002DK CIL_0002DK_0002 CGP 13:54503779-54565435

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032184 IEA SUMO polymer binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332772 SIMC1-003 protein_coding Homo_sapiens 0 1107
ENST00000341199 SIMC1-201 protein_coding Homo_sapiens 0 1559
ENST00000429602 SIMC1-202 protein_coding Homo_sapiens 0 1652
ENST00000430704 SIMC1-002 protein_coding Homo_sapiens 0 1428
ENST00000443967 SIMC1-001 protein_coding Homo_sapiens 0 1792
ENST00000467472 SIMC1-007 processed_transcript Homo_sapiens 0 302
ENST00000481515 SIMC1-004 retained_intron Homo_sapiens 0 385
ENST00000495423 SIMC1-006 retained_intron Homo_sapiens 0 459
ENST00000499314 RP11-1277A3.2-003 processed_transcript Homo_sapiens 0 601
ENST00000500444 RP11-1277A3.2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 446
ENST00000503595 SIMC1-009 processed_transcript Homo_sapiens 0 418
ENST00000514128 SIMC1-008 processed_transcript Homo_sapiens 0 294
ENST00000515045 RP11-1277A3.2-002 processed_transcript Homo_sapiens 0 558

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