C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000500444 RP11-1277A3.2-001 ENSG00000246596 9606 - 5:177626436-177672149 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungENST00000500444
Transcript ID Kidney Lung
ENST00000500444 1.419±0.00 1.548±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118072 Simc1-002 protein_coding Mus_musculus 0 582
ENSMUST00000121401 Simc1-001 protein_coding Mus_musculus 0 446
ENSMUST00000150011 Simc1-006 retained_intron Mus_musculus 2e-27 126
ENSMUST00000138869 Simc1-003 nonsense_mediated_decay Mus_musculus 2e-27 126

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