C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503293 FBXO8-002 ENSG00000164117 9606 - 4:174236969-174283667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000503293
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000503293 4.557±0.00 2.888±0.00 2.755±0.00 2.090±0.14 4.787±0.40 6.486±0.00 6.060±0.00 4.802±0.12 5.281±0.00 3.785±0.20 4.058±1.53 6.708±1.76 6.796±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007S CIL_00007S_0002 CGP 4:173524969-174284264
CIL_00007V CIL_00007V_0002 CGP 4:174236658-174333380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 NAS ubiquitin ligase complex
GO:0005086 IBA:IEA ARF guanyl-nucleotide exchange factor activity
GO:0005634 IBA nucleus
GO:0006511 NAS ubiquitin-dependent protein catabolic process
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040218 Fbxo8-001 protein_coding Mus_musculus 0 1310
ENSMUST00000110322 Fbxo8-002 protein_coding Mus_musculus 0 579
ENSMUST00000156840 Fbxo8-003 retained_intron Mus_musculus 0 342
ENSDART00000015323 fbxo8-201 protein_coding Danio_rerio 0 311
ENSDART00000129583 fbxo8-202 protein_coding Danio_rerio 0 311

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