C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mesoderm specific transcript pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503460 MESTP3-001 ENSG00000250927 9606 - 4:28823244-28824211 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryTestisENST00000503460
Transcript ID Colon Ovary Testis
ENST00000503460 0.396±0.00 0.042±0.00 0.055±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079S CIL_00079S_0001 CGP 4:26857678-31146805
CIL_00098M CIL_00098M_0001 VISTA 4:28590930-29192066

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163949 Mest-201 protein_coding Mus_musculus 0 881
ENSMUST00000128398 Mest-001 protein_coding Mus_musculus 0 575
ENSMUST00000157040 Mest-002 protein_coding Mus_musculus 0 571
ENSMUST00000124665 Mest-005 protein_coding Mus_musculus 0 569
ENSMUST00000137521 Mest-009 processed_transcript Mus_musculus 0 460
ENSMUST00000147400 Mest-004 protein_coding Mus_musculus 0 440
ENSMUST00000130751 Mest-010 processed_transcript Mus_musculus 0 424
ENSMUST00000149496 Mest-011 retained_intron Mus_musculus 0 320
ENSMUST00000151777 Mest-003 protein_coding Mus_musculus 0 276
ENSMUST00000115127 Mest-006 protein_coding Mus_musculus 0 270

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