C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 10, type 2 (T2-cadherin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503958 CDH10-004 ENSG00000040731 9606 - 5:24487532-24492963 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENST00000503958
Transcript ID Brain Kidney
ENST00000503958 2.724±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0002 CGP 5:24487100-27121150

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176409 Cdh10-006 retained_intron Mus_musculus 0 1050
ENSMUST00000040562 Cdh10-002 protein_coding Mus_musculus 0 1044
ENSMUST00000166873 Cdh10-001 protein_coding Mus_musculus 0 1044
ENSMUST00000176146 Cdh10-003 nonsense_mediated_decay Mus_musculus 0 985

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