C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504565 PPP2R2B-012 ENSG00000156475 9606 - 5:146701072-147081293 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverENST00000504565
Transcript ID Bladder Liver
ENST00000504565 1.345±0.00 1.494±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AE CIL_0001AE_0001 CGP 5:146513103-147084784
CIL_0001AF CIL_0001AF_0001 CGP 5:146581146-147387852

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120632 Ppp2r2b-003 protein_coding Mus_musculus 0 468
ENSMUST00000117687 Ppp2r2b-004 protein_coding Mus_musculus 0 468
ENSMUST00000136118 Ppp2r2b-002 processed_transcript Mus_musculus 0 468
ENSMUST00000025377 Ppp2r2b-001 protein_coding Mus_musculus 6e-28 128
ENSMUST00000155262 Ppp2r2b-005 processed_transcript Mus_musculus 2e-27 126
ENSMUST00000153737 Ppp2r2b-006 processed_transcript Mus_musculus 7e-27 124

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