C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117687 Ppp2r2b-004 ENSMUSG00000024500 10090 - 18:42645269-42899294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000117687
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000117687 2.177±2.24 2.023±0.45 27.839±5.94 0.341±0.17 0.225±0.00 0.124±0.08 0.813±0.24 0.132±0.07 0.679±0.35 0.136±0.00 3.213±1.14 0.208±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AE CIL_0001AE_0002 CGP 18:42578020-43059471
CIL_0001AF CIL_0001AF_0002 CGP 18:42637432-43317481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000159 IEA protein phosphatase type 2A complex
GO:0005739 ISS mitochondrion
GO:0005741 ISS mitochondrial outer membrane
GO:0005856 IEA cytoskeleton
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0008601 IEA protein phosphatase type 2A regulator activity
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000014124 ppp2r2d-201 protein_coding Danio_rerio 0 730
ENSDART00000114401 ppp2r2d-202 protein_coding Danio_rerio 0 730
ENSDART00000132470 ppp2r2d-001 protein_coding Danio_rerio 0 575
ENSDART00000154293 ppp2r2d-002 protein_coding Danio_rerio 2e-32 145
ENST00000336640 PPP2R2B-003 protein_coding Homo_sapiens 0 2381
ENST00000394409 PPP2R2B-002 protein_coding Homo_sapiens 0 3107
ENST00000394411 PPP2R2B-017 protein_coding Homo_sapiens 0 2726
ENST00000394413 PPP2R2B-201 protein_coding Homo_sapiens 0 2379
ENST00000394414 PPP2R2B-001 protein_coding Homo_sapiens 0 2724
ENST00000453001 PPP2R2B-202 protein_coding Homo_sapiens 0 2379
ENST00000502876 PPP2R2B-007 processed_transcript Homo_sapiens 0 305
ENST00000504198 PPP2R2B-009 protein_coding Homo_sapiens 0 2381
ENST00000504565 PPP2R2B-012 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000508267 PPP2R2B-011 protein_coding Homo_sapiens 0 272
ENST00000508545 PPP2R2B-008 protein_coding Homo_sapiens 0 2379
ENST00000509721 PPP2R2B-004 processed_transcript Homo_sapiens 0 446
ENST00000512011 PPP2R2B-006 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000512639 PPP2R2B-010 nonsense_mediated_decay Homo_sapiens 0 1932
ENST00000512984 PPP2R2B-013 protein_coding Homo_sapiens 0 292
ENST00000515880 PPP2R2B-005 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000522831 PPP2R2B-015 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000528601 PPP2R2B-018 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000530902 PPP2R2B-016 processed_transcript Homo_sapiens 0 2723
ENST00000532154 PPP2R2B-019 nonsense_mediated_decay Homo_sapiens 0 350

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